If you found this site useful, please cite: Croote, D., Quake, S.R. Food allergen detection by mass spectrometry: the role of systems biology. npj Syst Biol Appl. 2016 Sep 29; 2:16022.

Almond Protein: Pru du 6 | Amandin, 11S Globulin Legumin-Like Protein

Isoform:

Empirical Proteotypic Peptide Explorer:

This rose plot enables visualization of proteotypic peptides. Each colored rose petal corresponds to a peptide and is bounded by thin gray petals, which represent tryptic cut sites. The radial magnitude of each peptide corresponds to the number of publications which report it.

Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.


Sequence - 551 amino acids

MAKAFVFSLCLLLVFNGCLAARQSQLSPQNQCQLNQLQAREPDNRIQAEAGQIETWNFNQEDFQCAGVAASRITIQRNGLHLPSYSNAPQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQFDRHQKTRRIREGDVVAIPAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQGSGNNVFSGFNTQLLAQALNVNEETARNLQGQNDNRNQIIRVRGNLDFVQPPRGRQEREHEERQQEQLQQERQQQGGQLMANGLEETFCSLRLKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAGNQGFEYFAFKTEENAFINTLAGRTSFLRALPDEVLANAYQISREQARQLKYNRQETIALSSSQQRRAVV

UniProt: E3SH28   IUIS: Pru du 6

Empirical Proteotypic Peptide Explorer:

This rose plot enables visualization of proteotypic peptides. Each colored rose petal corresponds to a peptide and is bounded by thin gray petals, which represent tryptic cut sites. The radial magnitude of each peptide corresponds to the number of publications which report it.

Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.


Sequence - 504 amino acids

CLLLLFNGCLASRQHIFGQNKEWQLNQLEAREPDNHIQSEAGVTESWNPSDPQFQLAGVAVVRRTIEPNGLHLPSYVNAPQLIYIVRGRGVLGAVFPGCAETFEDSQPQQFQQQQQQQQFRPSRQEGGQGQQQFQGEDQQDRHQKIRHIREGDIIALPAGVAYWSYNNGEQPLVAVSLLDLNNDQNQLDQVPRRFYLAGNPQDEFNPQQQGRQQQQQQQGQQGNGNNIFSGFDTQLLAQALNVNPETARNLQGQDDNRNEIVRVQGQLDFVSPFSRSAGGRGDQERQQEEQQSQREREEKQREQEQQGGGGQDNGVEETFCSARLSQNIGDPSRADFYNPQGGRISVVNRNHLPILRYLRLSAEKGVLYNNAIYTPHWHTNANALVYAIRGNARVQVVNENGDPILDDEVREGQLFLIPQNHAVITQASNEGFEYISFRTDENGFTNTLAGRTSVLRALPDEVLQNAFRISRQEARNLKYNRQESRLLSATSPPRGRLMSILGY

UniProt: E3SH29   IUIS: Pru du 6

Peptide Selector Tool

Explore peptide targets for mass spectrometry by adjusting the selection criteria below. Results from empirical and computational prediction tools have been aggregated for convenience.

Exclude:
Peptide Characteristics:

Minimum length:

Maximum length:

1Peptide2Exp.3ESP4CONSeQ5
R LMSILGY $ 0 0.196 0.35906
K ENIGNPER A 0 0.211 0.19948
R ADIFSPR A 1 0.274 0.33404
R LSQNIGDPSR A 1 0.444 0.75606
K EWQLNQLEAR E 0 0.406 0.4331
R QHIFGQNK E 0 0.281 0.2444
R QQEEQQSQR E 0 0.199 0.29186
R QSQLSPQNQCQLNQLQAR E 0 0.607 0.41646
R VQVVNENGDPILDDEVR E 1 0.714 0.45464
R ALPDEVLANAYQISR E 6 0.795 0.8587
R ISTLNSHNLPILR F 3 0.686 0.49374
K GVLYNNAIYTPHWHTNANALVYAIR G 0 0.351 0.0633
R NGLHLPSYSNAPQLIYIVQGR G 3 0.657 0.10488
R TIEPNGLHLPSYVNAPQLIYIVR G 0 0.766 0.11022
R NGIYSPHWNVNAHSVVYVIR G 1 0.425 0.17336
R LLSATSPPR G 2 0.401 0.71338
R GNLDFVQPPR G 6 0.642 0.77796
R QEGGQGQQQFQGEDQQDR H 0 0.637 0.33556
R IQAEAGQIETWNFNQEDFQCAGVAASR I 0 0.345 0.13008
R ADFYNPQGGR I 2 0.484 0.41086
R ALPDEVLQNAFR I 1 0.812 0.85814
R QQQGGQLMANGLEETFCSLR L 0 0.566 0.17606
R EQEQQGGGGQDNGVEETFCSAR L 0 0.567 0.43352
R NLQGQDDNR N 0 0.275 0.15902
R NLQGQNDNR N 1 0.286 0.20464
K AFVFSLCLLLVFNGCLAAR Q 0 0.227 0.09992
K FYLAGNPENEFNQQGQSQPR Q 1 0.779 0.44558
R QQQEEGR Q 0 0.216 0.1398
R QQEQEQER Q 0 0.209 0.26778
R QQQQQGEQGR Q 0 0.263 0.27344
R QQGEQGRPGQHQQPFGRPR Q 0 0.249 0.31648
R QQGQQEQQQER Q 1 0.245 0.32678
R QQEQLQQER Q 4 0.244 0.33544
R QQEQQQGQQGRPQQQQQFR Q 1 0.297 0.37798
R GVLGAVFSGCPETFEESQQSSQQGR Q 2 0.505 0.38044
R FYLAGNPQDEFNPQQQGR Q 1 0.81 0.4381
^ CLLLLFNGCLASR Q 0 0.42 0.25768
R QETIALSSSQQR R 3 0.43 0.53732
R VQGQLDFVSPFSR S 1 0.803 0.74446
K TEENAFINTLAGR T 3 0.709 0.87564
R EGQLFLIPQNHAVITQASNEGFEYISFR T 0 0.373 0.03568
R TDENGFTNTLAGR T 2 0.659 0.7319
R NHLPILR Y 1 0.317 0.27074

1 Previous amino acid (^ = Start of protein)

2 Next amino acid ($ = End of protein)

3 Exp. = Number of publications in which this peptide has been reported experimentally

4 ESP = ESP Predictor. Fusaro VA, et al. Nat Botechnol 2009; 27(2): 190-198. doi

5 CONSeQ = CONSeQuence. Eyers CE, et al. Mol Cell Proteomics 2011; 10(11). doi

Underline: Peptide occurs within the first 20 amino acids from the start of the protein. Use caution as the protein may contain a cleaved signaling sequence.

Strike-through: Peptide is present in a protein from another allergen species and is thus nonspecific.