Croote, D., Quake, S.R. Food allergen detection by mass spectrometry: the role of systems biology. npj Syst Biol Appl. 2016 Sep 29; 2:16022.
Peptide: RPCFTAMGVDTK
Peptide within the protein Gal-d-5:
MKWVTLISFIFLFSSATSRNLQRFARDAEHKSEIAHRYNDLKEETFKAVAMITFAQYLQRCSYEGLSKLVKDVVDLAQKCVANEDAPECSKPLPSIILDEICQVEKLRDSYGAMADCCSKADPERNECFLSFKVSQPDFVQPYQRPASDVICQEYQDNRVSFLGHFIYSVARRHPFLYAPAILSFAVDFEHALQSCCKESDVGACLDTKEIVMREKAKGVSVKQQYFCGILKQFGDRVFQARQLIYLSQKYPKAPFSEVSKFVHDSIGVHKECCEGDMVECMDDMARMMSNLCSQQDVFSGKIKDCCEKPIVERSQCIMEAEFDEKPADLPSLVEKYIEDKEVCKSFEAGHDAFMAEFVYEYSRRHPEFSIQLIMRIAKGYESLLEKCCKTDNPAECYANAQEQLNQHIKETQDVVKTNCDLLHDHGEADFLKSILIRYTKKMPQVPTDLLLETGKKMTTIGTKCCQLGEDRRMACSEGYLSIVIHDTCRKQETTPINDNVSQCCSQLYANRRPCFTAMGVDTKYVPPPFNPDMFSFDEKLCSAPAEEREVGQMKLLINLIKRKPQMTEEQIKTIADGFTAMVDKCCKQSDINTCFGEEGANLIVQSRATLGIGA
References reporting this peptide:
None.
Species Uniqueness
Species containing the peptide RPCFTAMGVDTK are presented below. Accessions and taxid values link to further information hosted on NCBI.
| Species name | Common name | Accession(s) | Tax ID |
|---|---|---|---|
| Podiceps cristatus | Great crested grebe | KFZ60889 |
345573 |
| Pterocles gutturalis | Yellow-throated sandgrouse | XP_010071465 |
240206 |
| Caprimulgus carolinensis | Chuck-will's-widow | KFZ66285 XP_010174444 |
279965 |
| Cathartes aura | Turkey vulture | KFP49194 |
43455 |
| Balearica pavonina gibbericeps | Balearica pavonina gibbericeps | KFO15181 XP_010309422 |
100784 |
| Picoides pubescens | Downy woodpecker | KFV64724 XP_009895330 |
118200 |
| Amazona aestiva | Blue-fronted amazon | KQL60778 |
12930 |
| Aptenodytes forsteri | Emperor penguin | KFM07573 XP_009277602 |
9233 |
| Aquila chrysaetos canadensis | Aquila chrysaetos canadensis | XP_011581593 |
216574 |
| Charadrius vociferus | Charadrius vociferus | XP_009885406 |
50402 |
| Columba livia | Rock pigeon | XP_005498595 EMC85061 |
8932 |
| Corvus brachyrhynchos | American crow | KFO57797 XP_008630163 |
85066 |
| Corvus cornix cornix | Corvus cornix cornix | XP_010411803 XP_010411801 |
932674 |
| Coturnix japonica | Japanese quail | XP_015717009 |
93934 |
| Cuculus canorus | Common cuckoo | KFO70657 XP_009568513 |
55661 |
| Falco cherrug | Saker falcon | XP_014132350 |
345164 |
| Falco peregrinus | Peregrine falcon | XP_005243242 |
8954 |
| Gallus gallus | Chicken | NP_990592 P19121 |
9031 |
| Geospiza fortis | Medium ground-finch | XP_005429097 |
48883 |
| Haliaeetus albicilla | White-tailed eagle | XP_009927608 |
8969 |
| Haliaeetus leucocephalus | Bald eagle | XP_010573792 |
52644 |
| Larus argentatus | Larus argentatus | AAL01533 |
35669 |
| Lepidothrix coronata | Lepidothrix coronata | XP_017693449 |
321398 |
| Manacus vitellinus | Golden-collared manakin | XP_008927545 |
328815 |
| Meleagris gallopavo | Turkey | XP_010707950 |
9103 |
| Melopsittacus undulatus | Budgerigar | XP_005144193 |
13146 |
| Mesitornis unicolor | Brown roatelo | XP_010179721 KFQ32777 |
54374 |
| Nestor notabilis | Kea | XP_010015102 |
176057 |
| Nipponia nippon | Crested ibis | XP_009466925 KFR00916 |
128390 |
| Opisthocomus hoazin | Opisthocomus hoazin | XP_009935539 KFR12864 |
30419 |
| Parus major | Great tit | XP_015479375 |
9157 |
| Pelecanus crispus | Pelecanus crispus | XP_009487776 |
36300 |
| Phaethon lepturus | Phaethon lepturus | KFQ78983 XP_010289472 |
97097 |
| Philomachus pugnax | Philomachus pugnax | XP_014793845 XP_014793846 |
198806 |
| Phoenicopterus ruber ruber | Phoenicopterus ruber ruber | KFQ84621 |
9218 |
| Pygoscelis adeliae | Adelie penguin | XP_009323154 XP_009323153 KFW67675 |
9238 |
| Serinus canaria | Common canary | XP_009096760 |
9135 |
| Sturnus vulgaris | Common starling | XP_014740405 |
9172 |
| Tyto alba | Barn owl | XP_009966448 KFV52665 |
56313 |
| Zonotrichia albicollis | White-throated sparrow | XP_005495222 |
44394 |
BLAST non-redundant protein database version: 4, date: December 9, 2015.
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