Croote, D., Quake, S.R. Food allergen detection by mass spectrometry: the role of systems biology. npj Syst Biol Appl. 2016 Sep 29; 2:16022.
This rose plot enables visualization of proteotypic peptides. Each colored rose petal corresponds to a peptide and is bounded by thin gray petals, which represent tryptic cut sites. The radial magnitude of each peptide corresponds to the number of publications which report it.
Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.
MANPSLLSLSVCLLILFHGCLASRQQGQQQNECQIDQLDALEPDNRVEYEAGMVETWDPNHEQFRCAGVAVARHTIQPNGLRLPEYSNAPTLMYIVEGEGMTGTLIPGCPETYQAPQQGQQHGQSSRFQDKHQKIQRFRKGDIIALPAGVANWCYNEGNSPVVTVTLLDVSNSQNQLDMYPRKFNLAGNPEDEFQQQQQQQSRGRRQSQQKSCNNIFCGFDTKILAEVFQVEQSLVKQLQNEKDNRGAIVKVKGDLQVIRPPRRQSERGFESEEESEYERGRRGRDNGLEETICTMKLKENIHDPSRSDIYTPEVGRITSLNSLNLPILKWLQLSAERGVLQNNALMVPHWNFNAHSIVYGCKGNAQVQVVDNFGNTVFDGEVSEGQIFVVPQNFAVVKRARGQRFEWISFKTNDRAMISPLAGSTSVLRAMPEEVLANAFQISREDARKIKFNNEQPTLSSGQSSQQMRDDA
UniProt: B7SLJ1 IUIS: Pis v 5Explore peptide targets for mass spectrometry by adjusting the selection criteria below. Results from empirical and computational prediction tools have been aggregated for convenience.
| 1 | Peptide | 2 | Exp.3 | ESP4 | CONSeQ5 |
|---|---|---|---|---|---|
| ^ | MANPSLLSLSVCLLILFHGCLASR | Q | 0 | 0.305 | 0.07346 |
| R | QQGQQQNECQIDQLDALEPDNR | V | 0 | 0.684 | 0.4015 |
| R | VEYEAGMVETWDPNHEQFR | C | 0 | 0.536 | 0.17282 |
| R | CAGVAVAR | H | 0 | 0.289 | 0.46618 |
| R | HTIQPNGLR | L | 0 | 0.405 | 0.43644 |
| K | FNLAGNPEDEFQQQQQQQSR | G | 0 | 0.663 | 0.43066 |
| K | SCNNIFCGFDTK | I | 0 | 0.551 | 0.25812 |
| K | ILAEVFQVEQSLVK | Q | 0 | 0.548 | 0.27314 |
| K | GDLQVIRPPR | R | 0 | 0.312 | 0.46282 |
| R | GFESEEESEYER | G | 0 | 0.454 | 0.30958 |
| R | DNGLEETICTMK | L | 0 | 0.405 | 0.46754 |
| K | ENIHDPSR | S | 0 | 0.26 | 0.1486 |
| R | SDIYTPEVGR | I | 0 | 0.513 | 0.8501 |
| R | ITSLNSLNLPILK | W | 2 | 0.623 | 0.43696 |
| K | WLQLSAER | G | 0 | 0.304 | 0.40794 |
| R | GVLQNNALMVPHWNFNAHSIVYGCK | G | 0 | 0.362 | 0.04032 |
| R | FEWISFK | T | 0 | 0.226 | 0.18112 |
| R | AMISPLAGSTSVLR | A | 2 | 0.58 | 0.76954 |
| R | AMPEEVLANAFQISR | E | 0 | 0.673 | 0.7165 |
| K | FNNEQPTLSSGQSSQQMR | D | 0 | 0.594 | 0.41112 |
1 Previous amino acid (^ = Start of protein)
2 Next amino acid ($ = End of protein)
3 Exp. = Number of publications in which this peptide has been reported experimentally
4 ESP = ESP Predictor. Fusaro VA, et al. Nat Botechnol 2009; 27(2): 190-198. doi
5 CONSeQ = CONSeQuence. Eyers CE, et al. Mol Cell Proteomics 2011; 10(11). doi
Underline: Peptide occurs within the first 20 amino acids from the start of the protein. Use caution as the protein may contain a cleaved signaling sequence.
Strike-through: Peptide is present in a protein from another allergen species and is thus nonspecific.