Croote, D., Quake, S.R. Food allergen detection by mass spectrometry: the role of systems biology. npj Syst Biol Appl. 2016 Sep 29; 2:16022.
This rose plot enables visualization of proteotypic peptides. Each colored rose petal corresponds to a peptide and is bounded by thin gray petals, which represent tryptic cut sites. The radial magnitude of each peptide corresponds to the number of publications which report it.
Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.
MTKFTILLISLLFCIAHTCSASKWQHQQDSCRKQLQGVNLTPCEKHIMEKIQGRGDDDDDDDDDNHILRTMRGRINYIRRNEGKDEDEEEEGHMQKCCTEMSELRSPKCQCKALQKIMENQSEELEEKQKKKMEKELINLATMCRFGPMIQCDLSSDD
UniProt: P19594 IUIS: Gly m 8Explore peptide targets for mass spectrometry by adjusting the selection criteria below. Results from empirical and computational prediction tools have been aggregated for convenience.
1 | Peptide | 2 | Exp.3 | ESP4 | CONSeQ5 |
---|---|---|---|---|---|
K | FTILLISLLFCIAHTCSASK | W | 0 | 0.338 | 0.08882 |
K | WQHQQDSCR | K | 0 | 0.226 | 0.15918 |
K | QLQGVNLTPCEK | H | 0 | 0.581 | 0.84538 |
R | GDDDDDDDDDNHILR | T | 0 | 0.567 | 0.22736 |
K | DEDEEEEGHMQK | C | 0 | 0.379 | 0.20414 |
K | CCTEMSELR | S | 1 | 0.266 | 0.30562 |
K | IMENQSEELEEK | Q | 1 | 0.342 | 0.44108 |
K | ELINLATMCR | F | 4 | 0.4 | 0.31758 |
R | FGPMIQCDLSSDD | $ | 0 | 0.239 | 0.3666 |
1 Previous amino acid (^ = Start of protein)
2 Next amino acid ($ = End of protein)
3 Exp. = Number of publications in which this peptide has been reported experimentally
4 ESP = ESP Predictor. Fusaro VA, et al. Nat Botechnol 2009; 27(2): 190-198. doi
5 CONSeQ = CONSeQuence. Eyers CE, et al. Mol Cell Proteomics 2011; 10(11). doi
Underline: Peptide occurs within the first 20 amino acids from the start of the protein. Use caution as the protein may contain a cleaved signaling sequence.
Strike-through: Peptide is present in a protein from another allergen species and is thus nonspecific.