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Croote, D., Quake, S.R. Food allergen detection by mass spectrometry: the role of systems biology. npj Syst Biol Appl. 2016 Sep 29; 2:16022.

Allergen Targets

Egg


Food Matrix

Egg

Exploring the Chicken Egg White Proteome with Combinatorial Peptide Ligand Libraries

D’Ambrosio C., Arena S., Scaloni A., Guerrier L., Boschetti E., Mendieta M.Elena, Citterio A., Righetti P.Giorgio

Journal of Proteome Research (2008), 7, 8, 3461--3474 DOI: 10.1021/pr800193y

Abstract

The use of two types of peptide ligand libraries (PLL), containing hexapeptides terminating either with a primary amine or modified with a terminal carboxyl group, allowed the discovery and identification of a large number of previously unreported egg white proteins. Whereas the most comprehensive list up to date ( Mann, K., Proteomics 2007 , 7 , 3558 - 3568 ) tabulated 78 unique gene products, our findings have almost doubled that value to 148 unique protein species. From the initial nontreated egg, it was possible to find 41 protein species; the difference (107 proteins) was generated as a result of the use of PLLs from which a similar number of species (112 and 109, respectively) was evidenced. Of those, 35 proteins were the specific catch of the amino-terminus PLL, while 33 were uniquely captured by the carboxy-terminus PLL. While a number of these low-abundance proteins might have a biological role in maintaining the integrity of the egg white and protecting the yolk, others might be derived from decaying epithelial cells lining the oviduct and/or represent remnants of products from the magnum and eggshell membrane components secreted by the isthmus, which might ultimately be incorporated, even if in trace amounts, into the egg white. The list of egg white components here reported is by far the most comprehensive at present and could serve as a starting point for isolation and functional characterization of proteins possibly having novel pharmaceutical and biomedical applications.

Reference raw data

Reference ID Food Protein Peptide
64 Egg Gal d 3 AIANNEADAISLDGGQVFEAGLAPYK
64 Egg Gal d 3 AQSDFGVDTK
64 Egg Gal d 3 CLVEKGDVAFIQHSTVEENTGGK
64 Egg Gal d 3 CVASSHEKYFGYTGALR
64 Egg Gal d 3 DDNKVEDIWSFLSK
64 Egg Gal d 3 DGKGDVAFVK
64 Egg Gal d 3 DLLFKDLTK
64 Egg Gal d 3 DLLFKDSAIMLK
64 Egg Gal d 3 ECNLAEVPTHAVVVRPEK
64 Egg Gal d 3 EFLGDKFYTVISSLK
64 Egg Gal d 3 EGTTYKEFLGDKFYTVISSLK
64 Egg Gal d 3 FFSASCVPGATIEQK
64 Egg Gal d 3 FMMFESQNK
64 Egg Gal d 3 FMMFESQNKDLLFK
64 Egg Gal d 3 FYTVISSLK
64 Egg Gal d 3 GAIEWEGIESGSVEQAVAK
64 Egg Gal d 3 GDVAFIQHSTVEENTGGK
64 Egg Gal d 3 GDVAFIQHSTVEENTGGKNK
64 Egg Gal d 3 GEADAVALDGGLVYTAGVCGLVPVMAER
64 Egg Gal d 3 GTEFTVNDLQGK
64 Egg Gal d 3 HTTVNENAPDQKDEYELLCLDGSR
64 Egg Gal d 3 IALTCVQK
64 Egg Gal d 3 IMKGEADAVALDGGLVYTAGVCGLVPVMAER
64 Egg Gal d 3 IQWCAVGKDEK
64 Egg Gal d 3 ISLTCVQK
64 Egg Gal d 3 KDQLTPSPR
64 Egg Gal d 3 KGTEFTVNDLQGK
64 Egg Gal d 3 LCQLCQGSGGIPPEK
64 Egg Gal d 3 LKPIAAEVYEHTEGSTTSYYAVAVVK
64 Egg Gal d 3 LKPIAAEVYEHTEGSTTSYYAVAVVKK
64 Egg Gal d 3 NLQMDDFELLCTDGR
64 Egg Gal d 3 NLQMDDFELLCTDGRR
64 Egg Gal d 3 SAGWNIPIGTLIHR
64 Egg Gal d 3 SAGWNIPIGTLLHR
64 Egg Gal d 3 SDFHLFGPPGK
64 Egg Gal d 3 SDFHLFGPPGKK
64 Egg Gal d 3 SDFHLFGPPGKKDPVLK
64 Egg Gal d 3 TCNPSDILQMCSFLEGK
64 Egg Gal d 3 TDERPASYFAVAVAR
64 Egg Gal d 3 TGTCNFDEYFSEGCAPGSPPNSR
64 Egg Gal d 3 TGTCNFNEYFSEGCAPGSPPNSR
64 Egg Gal d 3 TSCHTGLGR
64 Egg Gal d 3 TVENFVALATGEK
64 Egg Gal d 3 WCTISSPEEK
64 Egg Gal d 3 WCTISSPEEKK
64 Egg Gal d 3 WSVVSNGDVECTVVDETK
64 Egg Gal d 3 WSVVSNGDVECTVVDETKDCIIK