Croote, D., Quake, S.R. Food allergen detection by mass spectrometry: the role of systems biology. npj Syst Biol Appl. 2016 Sep 29; 2:16022.
Peptide: TSCHTGLGR
Peptide within the protein Gal-d-3:
MKLILCTVLSLGIAAVCFAAPPKSVIRWCTISSPEEKKCNNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAISLDGGQAFEAGLAPYKLKPIAAEVYEHTEGSTTSYYAVAVVKKGTEFTVNDLQGKTSCHTGLGRSAGWNIPIGTLLHRGAIEWEGIESGSVEQAVAKFFSASCVPGATIEQKLCRQCKGDPKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNENAPDQKDEYELLCLDGSRQPVDNYKTCNWARVAAHAVVARDDNKVEDIWSFLSKAQSDFGVDTKSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVPSLMDSQLYLGFEYYSAIQSMRKDQLTPSPRENRIQWCAVGKDEKSKCDRWSVVSNGDVECTVVDETKDCIIKIMKGEADAVALDGGLVYTAGVCGLVPVMAERYDDESQCSKTDERPASYFAVAVARKDSNVNWNNLKGKKSCHTAVGRTAGWVIPMGLIHNRTGTCNFDEYFSEGCAPGSPPNSRLCQLCQGSGGIPPEKCVASSHEKYFGYTGALRCLVEKGDVAFIQHSTVEENTGGKNKADWAKNLQMDDFELLCTDGRRANVMDYRECNLAEVPTHAVVVRPEKANKIRDLLERQEKRFGVNGSEKSKFMMFESQNKDLLFKDLTKCLFKVREGTTYKEFLGDKFYTVISSLKTCNPSDILQMCSFLEGK
References reporting this peptide:
- D’Ambrosio C., et al. Exploring the Chicken Egg White Proteome with Combinatorial Peptide Ligand Libraries. Journal of Proteome Research. 2008
Species Uniqueness
Species containing the peptide TSCHTGLGR are presented below. Accessions and taxid values link to further information hosted on NCBI.
| Species name | Common name | Accession(s) | Tax ID |
|---|---|---|---|
| Acanthisitta chloris | Rifleman | XP_009068321 |
57068 |
| Amazona aestiva | Blue-fronted amazon | KQK76993 |
12930 |
| Anas platyrhynchos | Mallard | 1GVC_A 1GV8_A P56410 XP_005028125 EOA95316 |
8839 |
| Anas sp. | Anas sp. | 1OVB_A |
42806 |
| Anser cygnoides domesticus | Anser cygnoides domesticus | XP_013041783 XP_013041782 |
381198 |
| Apaloderma vittatum | Apaloderma vittatum | XP_009877739 |
57397 |
| Aptenodytes forsteri | Emperor penguin | XP_009283255 |
9233 |
| Aquila chrysaetos canadensis | Aquila chrysaetos canadensis | XP_011593308 |
216574 |
| Balearica pavonina gibbericeps | Balearica pavonina gibbericeps | KFO11797 XP_010302695 |
100784 |
| Buceros rhinoceros silvestris | Buceros rhinoceros silvestris | KFO92152 XP_010138359 |
175836 |
| Calypte anna | Anna's hummingbird | XP_008499075 |
9244 |
| Caprimulgus carolinensis | Chuck-will's-widow | XP_010166246 |
279965 |
| Cariama cristata | Red-legged seriema | KFP66580 XP_009701630 |
54380 |
| Chaetura pelagica | Chimney swift | XP_009999807 |
8897 |
| Charadrius vociferus | Charadrius vociferus | KGL93592 XP_009883697 |
50402 |
| Chlamydotis undulata macqueenii | Chlamydotis undulata macqueenii | KFP44125 XP_010123233 |
187382 |
| Colius striatus | Speckled mousebird | XP_010196065 |
57412 |
| Columba livia | Rock pigeon | EMC77941 XP_005501624 |
8932 |
| Corvus brachyrhynchos | American crow | XP_017584875 |
85066 |
| Corvus cornix cornix | Corvus cornix cornix | XP_010409467 |
932674 |
| Coturnix japonica | Japanese quail | XP_015726719 |
93934 |
| Cuculus canorus | Common cuckoo | XP_009568453 |
55661 |
| Dromaius novaehollandiae | Emu | BAJ23165 |
8790 |
| Egretta garzetta | Little egret | XP_009642729 KFP20647 |
188379 |
| Eurypyga helias | Sunbittern | XP_010157284 |
54383 |
| Falco cherrug | Saker falcon | XP_005437200 |
345164 |
| Falco peregrinus | Peregrine falcon | XP_005241619 |
8954 |
| Ficedula albicollis | Collared flycatcher | XP_005050800 |
59894 |
| Fulmarus glacialis | Northern fulmar | KFV98760 XP_009585683 |
30455 |
| Gallus gallus | Chicken | 1NNT_A 1NFT_A 1IEJ_A 2D3I_A 1N04_A BAE16338 BAE16339 BAE16337 P02789 |
9031 |
| Gavia stellata | Gavia stellata | KFV48063 XP_009819041 |
37040 |
| Geospiza fortis | Medium ground-finch | XP_005425104 |
48883 |
| Haliaeetus leucocephalus | Bald eagle | XP_010559587 |
52644 |
| Lepidothrix coronata | Lepidothrix coronata | XP_017681057 |
321398 |
| Leptosomus discolor | Leptosomus discolor | KFQ09755 XP_009947842 |
188344 |
| Manacus vitellinus | Golden-collared manakin | XP_008917849 KFW77420 XP_017935474 |
328815 |
| Meleagris gallopavo | Turkey | NP_001290136 |
9103 |
| Melopsittacus undulatus | Budgerigar | XP_005143141 |
13146 |
| Merops nubicus | Merops nubicus | XP_008933573 |
57421 |
| Mesitornis unicolor | Brown roatelo | XP_010183011 KFQ35901 |
54374 |
| Nestor notabilis | Kea | KFQ55193 XP_010018932 |
176057 |
| Nipponia nippon | Crested ibis | XP_009461052 |
128390 |
| Opisthocomus hoazin | Opisthocomus hoazin | XP_009939063 |
30419 |
| Parus major | Great tit | XP_015493693 |
9157 |
| Pelecanus crispus | Pelecanus crispus | KFQ66012 XP_009489081 |
36300 |
| Phaethon lepturus | Phaethon lepturus | XP_010293208 |
97097 |
| Phalacrocorax carbo | Great cormorant | KFW95347 XP_009511101 |
9209 |
| Philomachus pugnax | Philomachus pugnax | XP_014818405 |
198806 |
| Phoenicopterus ruber ruber | Phoenicopterus ruber ruber | KFQ88597 |
9218 |
| Picoides pubescens | Downy woodpecker | XP_009897742 |
118200 |
| Podiceps cristatus | Great crested grebe | KFZ63274 |
345573 |
| Pseudopodoces humilis | Tibetan ground-tit | XP_005529574 |
181119 |
| Pterocles gutturalis | Yellow-throated sandgrouse | KFV03293 XP_010071505 |
240206 |
| Pygoscelis adeliae | Adelie penguin | XP_009321153 |
9238 |
| Serinus canaria | Common canary | XP_009087744 |
9135 |
| Sturnus vulgaris | Common starling | XP_014725911 |
9172 |
| Taeniopygia guttata | Zebra finch | XP_002192726 |
59729 |
| Tauraco erythrolophus | Red-crested turaco | KFV13982 XP_009980548 |
121530 |
| Tyto alba | Barn owl | KFV39332 XP_009962506 |
56313 |
| Zonotrichia albicollis | White-throated sparrow | XP_005489599 |
44394 |
BLAST non-redundant protein database version: 4, date: December 9, 2015.
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