Croote, D., Quake, S.R. Food allergen detection by mass spectrometry: the role of systems biology. npj Syst Biol Appl. 2016 Sep 29; 2:16022.
Peptide: ALPLDVIK
Peptide within the protein Pis-v-2:
MGYSSLLSFSLGFLLLFHCSFAQIEQVVNSQQRQQQQRFQTQCQIQNLNALEPKRRIESEAGVTEFWDQNEEQLQCANVAVFRHTIQSRGLLVPSYDNAPELVYVVQGSGIHGAVFPGCPETFQEESQSRSRSERSQQSGEQHQKVRPIQEGDVIALPAGVAHWIYNNGQSKLVLVALADVGNSENQLDQYLRKFVLGGSPQQEIQGSGQSRSRSQSQSSRRGQQGQQSNNILSAFDEEILAQSFNIDTQLARRLQKEKRQRGIIVRVQEDLEVLSPHRQEQEQEYEEERERRQRNGLEETFCTMTLKYNINDPSRADVYNPRGGRVSSVNALNLPILRFLQLSAKKGVLHRDAILAPHWNVNAHSIVYITRGNGRIQIVSENGESVFDEEIREGQLVVVPQNFAVVKRASSDKFEWVSFKTNGLSQTSQLAGRVSVFRALPLDVIKNSFDISREDARRLKESRSETTIFAPGSSSQRKSQSERERQREREEREIH
MGYSSLLSFSLGFLLLFHCSFAQIEQVVNSQQRQQQQRFQTQCQIQNLNALEPKRRIESEAGVTEFWDQNEEQLQCANVAVFRHTIQSRGLLVPSYNNAPELVYVVQGSGIHGAVFPGCPETFQEESQSQSRSQHSRSERSQQSGEQHQKVRHIREGDIIALPAGVAHWIYNNGQSKLVLVALADVGNSENQLDQYLRKFVLGGSPQQEIQGGGQSWSQSRSSRKGQQSNNILSAFDEEILAQSFNIDTQLVKKLQREEKQRGIIVRVKEDLQVLSPQRQEKEYSDNGLEETFCTMTLKLNINDPSRADVYNPRGGRVTSINALNLPILRFLQLSVEKGVLYQNAIMAPHWNMNAHSIVYITRGNGRMQIVSENGESVFDEEIREGQLVVVPQNFAVVKRASSDGFEWVSFKTNGLAKISQLAGRISVMRGLPLDVIQNSFDISREDAWNLKESRSEMTIFAPGSRSQRQRN
References reporting this peptide:
- Planque, et al. Development of a strategy for the quantification of food allergens in several food products by mass spectrometry in a routine laboratory. Food Chemistry. 2019
- Planque, et al. Liquid chromatography coupled to tandem mass spectrometry for detecting ten allergens in complex and incurred foodstuffs. Journal of Chromatography A. 2017
Species Uniqueness
Species containing the peptide ALPLDVIK are presented below. Accessions and taxid values link to further information hosted on NCBI.
| Species name | Common name | Accession(s) | Tax ID |
|---|---|---|---|
| Auxenochlorella protothecoides | Auxenochlorella protothecoides | JAT72648 XP_011397239 |
3075 |
| Chlorella variabilis | Chlorella variabilis | XP_005848055 |
554065 |
| Hordeum vulgare subsp. vulgare | Domesticated barley | CAJ19095 |
112509 |
| Pistacia vera | Pistacia vera | ABG73109 |
55513 |
| Pygocentrus nattereri | Red-bellied piranha | XP_017538520 XP_017538519 |
42514 |
| Zygosaccharomyces bailii CLIB 213 | Zygosaccharomyces bailii clib 213 | CDF87673 |
1333698 |
| Zygosaccharomyces bailii ISA1307 | Zygosaccharomyces bailii isa1307 | CDH09577 CDH12944 |
1355161 |
| Zygosaccharomyces rouxii | Zygosaccharomyces rouxii | XP_002495753 |
4956 |
| Zygosaccharomyces rouxii CBS 732 | Zygosaccharomyces rouxii cbs 732 | XP_002495753 |
559307 |
BLAST non-redundant protein database version: 4, date: December 9, 2015.
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